CDS

Accession Number TCMCG016C27944
gbkey CDS
Protein Id OMO51768.1
Location join(5791..6165,6379..8616)
Organism Corchorus capsularis
locus_tag CCACVL1_29604

Protein

Length 870aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01015700.1
Definition hypothetical protein CCACVL1_29604 [Corchorus capsularis]
Locus_tag CCACVL1_29604

EGGNOG-MAPPER Annotation

COG_category U
Description Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K12396        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006903        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007032        [VIEW IN EMBL-EBI]
GO:0007033        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051648        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051650        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080171        [VIEW IN EMBL-EBI]
GO:1990019        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGGTCCATCACTCATGGATTCCTTGTTTCAACGCACTTTGGAGGACATAATCAAAGGCCTGAGACACCAACTGATCGGTGAACAAGCTTTCATTTCCAAGGCCCTGGAAGAAATCCGTAAGGAAATCAAATCCACTGACCTTTCCACCAAATCCACAGCTCTCCTCAAACTCTCTTACCTTTCATCTCTCCACTTCCATGACATGTCTTTTGCATCTTTCCATGCCTTGGAAGTCCTCTCTTCCCCTCGTTTTTCCCATAAAAAGATCGCTTACCATGCAATCTCACTTTCCTTCCATGATTCCACCCCTGTTCTTCTCCTTATAACTAATCATCTGCGCAAGGATCTTTCCAGTACCAATGAGTTTGAAATTTTATCTGCTGTTGTTGGGGTGTTTTGTGAACTTGCTTCTAAAGATCCCAGATCGTATCTCCCGTTGGCGCCTGAGTTTTATAAGATTTTGGTTGATTCAAAGAACAACTGGGTTTTGATCAAGGTGTTAAAGATTTTTGCTAAGTTGGCTCCTTTGGAACCAAGATTAGCAAAACGGGTCGTTGAGCCAATTTGTGATCATATGAGGAGAACTGGGGCGAAGTCATTGTTGTTTGAGTGTGTTAGAACTGTGGTGACTAGTTTGAGTGACTATGACTCTGCTGTGAGGCTTGCAGTAGGAAAGGTTCGGGAGTTTTTGGTGGATGAGGATCCGAATCTTAAGTATCTTGGGTTGCAGGCGCTTTCAATAGTAGCATCCAAGCACTTGTGGGCGGTGTCAGAGAATAAGGAAATTGTGATCAAGTCATTGAGTGATGCAGATCCTAATATTAAGATTGAGTCACTGCGTCTTGTGATGGCAATGGTGTCTGAAGATAATGTGCCTGAAATTTCCAGAGTTTTGGTCAATTATGCAATTAAATCTGATCCTGAATTTTGTAATGAGATTCTTGGCTCTATTTTATCAACTTGTTCTAGGAATGTGTATGAAATCATTGTTGATTTTGATTGGTATGTATCACTTCTTGGAGAGATGTCAAGAATCCCACATTGTCAAAAGGGAGAAGAAATTGAAAATCAGCTGATTGATATTGGTATGAGGGTCAAGGATGTCAGGCCAGAACTTGCCCGAGTCAGTCGTGATCTGTTGATTGATCCTGCTTTACTTGGAAATCCTTTCTTGCATAGGGTATTATCAGCCTCTGCTTGGGCCTCTGGAGAATATGTTGAGTTTTCAAGGAATCCGCTAGAACTTATGGAAGCACTATTACAACCGCGCACTAGTTTGTTGCCACCATCTATTAGGGCAATCTATATTCAGTCTGCCTTTAAAGTGTTAGCTTTTTGCCTGCGTACTTACCTTATGCTAAGGGGCACTGCTGCTTCCTCTACATGTCCTGATAATTTGCCCTCTGGAGTTTCCGCATCTATGTCCTATGAATCATTTGATGATCTGTCTGTAGAAAACGGTGGGGATGTAACTGTTACACATGGCCAGCCATCTACTTCTGCTTCTATTACTGATGAATCTATTGGAAACCTGTTTAATCTGGTTGAATTGACTTTGGGTCCTCTATTGGGAAGCCATGATGTGGAAGTAGAGGAGAGAGCACGGAATGTGGTTGGCTTTGTTGATATGACAAAACTCGGTTTACTGAATGCTTCAGCTCAAGAGGAAAAGGATATAGAGGGAAAAGGAGTGGAAGCTTCCAAAACTATCAAACTGATGTGTGATGCCTTCACCAAGGAGCTTGGTCCTGTCTCTATAAGTGCCCAGGGAAAAGTTCCTCTTCCAGATGGGTTAGAGCTTAAGGAGAACCTTGGCGATTTGGAAATGATTTGTGGTGATATTGAACAACCTTCATCAAACTCAGTTTCTTTTGGAAGTTCTTATGAGGAAAAGGTTGATGTTTCTTTCTCTAACCTTCAGATCAAAGAAGACTCTGAGCAGTCAAACGAGTCCACTTCTCTGTTAGCTGAGCATCGTAAGCGCCATGGGTTGTATTATCTATCTACGGGACAGAGTGAAACAATTTCAAATGATTATCCTCCTGCCAATGATCCCATGTCACAGGGCAATATCAATGATAATGCCGATGATCTTGTTAAACTTGCAGAGGATTCTCTTATCCCTAAGAAAAAACTGAACCATGTCAAGCCTAGGCCTGTGGTGGTGAAATTGGATGAAATGGATGAGAAACCTTTTGCAACGAAGAAGTGTGACCCAAAGGATGACTCACTCTCAGGTGCTGTGTGGGATATTCTTCTGGGTAGTGAAGATATGGTGCCCACGTCATCAAGAAGCAACCTCTCTGATAAACCATCTAACAAGATAAAAGGGAAGGAAAAACAACGTACAGAACCTCATTTGGAATCAAAAGAAAATTTAGTTGAGGATGGAAATTCTAGTTCAAGAAGGAGAAAACACCGTAGCCATGGTAAAGAGAGAAGACATAAAAGTCCGAGGAAAAAGAATGCAGAGGAAGGGGAAGATAGTGTGCAGAAAGTAAAAGAGAAGAGAAGTCATCGCCATGGCAGACATAAATCACGACAAAGAGCTGATGAACCTTTGAATGTTACTCCACAAACACCTGTGATTCCCGATTTCCTTCTATAG
Protein:  
MSGPSLMDSLFQRTLEDIIKGLRHQLIGEQAFISKALEEIRKEIKSTDLSTKSTALLKLSYLSSLHFHDMSFASFHALEVLSSPRFSHKKIAYHAISLSFHDSTPVLLLITNHLRKDLSSTNEFEILSAVVGVFCELASKDPRSYLPLAPEFYKILVDSKNNWVLIKVLKIFAKLAPLEPRLAKRVVEPICDHMRRTGAKSLLFECVRTVVTSLSDYDSAVRLAVGKVREFLVDEDPNLKYLGLQALSIVASKHLWAVSENKEIVIKSLSDADPNIKIESLRLVMAMVSEDNVPEISRVLVNYAIKSDPEFCNEILGSILSTCSRNVYEIIVDFDWYVSLLGEMSRIPHCQKGEEIENQLIDIGMRVKDVRPELARVSRDLLIDPALLGNPFLHRVLSASAWASGEYVEFSRNPLELMEALLQPRTSLLPPSIRAIYIQSAFKVLAFCLRTYLMLRGTAASSTCPDNLPSGVSASMSYESFDDLSVENGGDVTVTHGQPSTSASITDESIGNLFNLVELTLGPLLGSHDVEVEERARNVVGFVDMTKLGLLNASAQEEKDIEGKGVEASKTIKLMCDAFTKELGPVSISAQGKVPLPDGLELKENLGDLEMICGDIEQPSSNSVSFGSSYEEKVDVSFSNLQIKEDSEQSNESTSLLAEHRKRHGLYYLSTGQSETISNDYPPANDPMSQGNINDNADDLVKLAEDSLIPKKKLNHVKPRPVVVKLDEMDEKPFATKKCDPKDDSLSGAVWDILLGSEDMVPTSSRSNLSDKPSNKIKGKEKQRTEPHLESKENLVEDGNSSSRRRKHRSHGKERRHKSPRKKNAEEGEDSVQKVKEKRSHRHGRHKSRQRADEPLNVTPQTPVIPDFLL